Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMWFRRDLRVNDNKALYHACKE-D-DLLLLFQVNPAQFITGS-P--SHQAFFASVAHFKQEVDKT-ALLQIMFGE----PVECLKQLKETLPSWDKVYFNRDETGYGAERDEAAKTFFDEQEIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKE-TPFK--VTLKADNIRKENLFPKYEEQFA--E---MTCDLPILDSGEKTANTRLANFIKHDVADYDKARDFPELDKTSHLSRYLRTGEISVRTIWQALQEN----EATEGRAIFEKELCWRDFYNMIYVSFPNQK-NEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKERRKLAIARYEFSKEHYRGNI |
| 1DNP Chain:A ((1-469)) | TTHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAEN-SVTHLFYNYQYEVNERARDVEVERALR--NVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSS-GSI---E--PSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWAQ----KAGVT--LDYPQPIVEHKEARVQTLAAYEAARK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78790 for 3729 contacts (-21.1/contact) +
2D Compatibility (PS) -47400 + (NN) -14076 + (LL) 1356
1D Compatibility (HY) -28800 + (ID) 8600
Total energy: -176310.0 ( -47.28 by residue)
QMean score : 0.404
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