Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLAATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGIIFGPTGGFIIGFIFNAFLTGWLLEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAVFAALLGIIIRDRLIKAKLLRAS
1C06 Chain:A ((1-159))
MKLSEYGLQLQEKQKLRHMYGV--NERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNL------QVIKEALEANNYIPDYLSFDPEK------MEGTYTRLPE-------RSELPAEINEALIVEFYSR--
General information:
TITO was launched using:
RESULT:
Template:
1C06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151801 for 1151 contacts (-131.9/contact) +
2D Compatibility (PS) -15987 + (NN) 5773 + (LL) 2100
1D Compatibility (HY) 2400 + (ID) 950
Total energy: -158465.0 ( -137.68 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1C06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C06-query.scw
PDB file :
Tito_Scwrl_1C06.pdb
: