Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWYKMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLITRVFAFLGLFLWARDYLIKDKKYLVPIYFVSLAFALTPFWPSGMLSTLGMPLALWAFLNIRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVHIRFLLSMLYMGLIYVIVNYRFIYAMFLHPEPDSRSEFSLPNLSFLSSIRLSFKNFIFGHTHDQALAGYVILPILLLVLVLIIIKREWVKEKLFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIMRTF-NFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVAIVLQLIVVFANN----SEIYYRTG------NGSPSINQFYATEQMEEIKDYIGKPQSSYRVGSI--GLHPSVSQESGFYTVDGYVNSYPLAYKRA-FRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKNYDFGKDSKKHIKQLDFNTEAFKKVGGEYVLSAVPIDNASEVGLQFEKAFDNKESYWKIYLYKATN |
| 4QT4 Chain:A ((1-189)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDK-NFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNID--------ITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFEKTMQKFNG------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154230 for 1355 contacts (-113.8/contact) +
2D Compatibility (PS) -17830 + (NN) 3183 + (LL) 30580
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -145347.0 ( -107.27 by residue)
QMean score : 0.202
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