Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSEIRKLLQEIKKQVDNPGNSSTTEI------KKMASEAGIDEQT----AEEI-------YHLLTEFYQAVEEHGGIEKYMHS-------NISWLKIEL-----ELL---SACYQIAILEDMKVLDISEMLS-----LNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKR----KTQKNTKKEKTNI--FGKVVPAEFK-APASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDL--LKSIYSLSSLAVQKEELDKKYQDL--QTKCQELEQENSYLKQQNETM---TDSFHTLVLQVADFAYASDLDQIQALPLFSQQLVVTLNQLGVFKENYKQM |
| 2W0C Chain:L ((1-335)) | MIVKK-KLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLRTIVRQGVSIKGMNYTSVMLHTEYAQEIEYWVGDLDYSFQEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEA-GQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSD-------DPLLTVKGYAQILMERT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 83583 for 1873 contacts (44.6/contact) +
2D Compatibility (PS) -28466 + (NN) 14428 + (LL) 1780
1D Compatibility (HY) -8800 + (ID) 2900
Total energy: 59625.0 ( 31.83 by residue)
QMean score : 0.053
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