Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVVGKKQVEPK-ESLAEELVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIAPSLVSAKLLDSEPETKLPSAPLELKEVKETLAAIAKQAIDQPKIDSAPQVAQPPEMNTPKEPTKNTTREQQPPPELIMPTKDSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
| 2HQY Chain:A ((1-298)) | MIPFKDI--TLADRDTITAFTMKSDRRNCDLSFSNLCS-------------WRFLYDTQFAVIDDFLVFKFWAGEQLAYMMPVGNGDLKAVLRKLIEDADKEKHNFCMLGVC--SNMRADLEAILPERFIFTEDRAYADYIYLRSDLATLKG---------KKFQAKRNHINRFRNT------YPDYEYTPITPDRIQECLDLEAEWCKVNNCDQQEGTGNERRALIYALHNFEALGLTGGILHVNGKIVAFTFGMPIN---HETFGVHVEKADTSIDGAYAMINYEFANRIPEQYIYIN---------REEDLGI-----EGLRKAKLSYQPVTILEKYMACLKDH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 125278 for 2403 contacts (52.1/contact) +
2D Compatibility (PS) -30928 + (NN) -3268 + (LL) 3336
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: 85218.0 ( 35.46 by residue)
QMean score : 0.136
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