Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | GGIVILKRFFSYYKPYRTLFIIDFGCAVLAAILELAFPVAVNHVIDTLLPGKDFG--LIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPFGFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFI-SIMSLFGAFFLMLNINVKLAISTFILVPILTVLIVYFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAF-ANEPHEKGRFKVLNQAYRKS--KLMFYKVMGLSFSFNYFLMRLISLFALLFGAYFTINGEISYGEFVGFILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMD--TEPAIQDEKDAKPAEAFRGDIAYNQVSFEYSDGKNVLNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITIDGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDASDEEIEHVVKLAHLSKVVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVIQASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHDELLAQDNGAYKRLYDAQFNTI |
| 4S0F Chain:B ((161-725)) | --------FAGFLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIF--LLQIFLNYYRSILVTKLGMSIDKSIMMEYYSHVLKLPMNFFNSRKVGEIISRFM-DASKIRQAISGATLTIMIDTIMAVIGGILLYIQ-NSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLY--INLS-SLTGIVAGLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKELREDSD-DFVISLKGDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDQATSNLDSITENHIKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIAL-KGCYFKMWKQTE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -314969 for 4200 contacts (-75.0/contact) +
2D Compatibility (PS) -59074 + (NN) -22676 + (LL) 1708
1D Compatibility (HY) -58400 + (ID) 9300
Total energy: -462711.0 ( -110.17 by residue)
QMean score : 0.366
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