Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIE-----YQP----YLDD---AEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPA-DMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVP-LSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
| 2INF Chain:A ((127-345)) | ---------------------------------------------------------------------------------------------------------------------ETIKLLVNEQLN-VPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVG--------------ALNQADYRTYIKPVMNRIFSELAKENVPLIMFGV-GAS-----------HLAGDW-HDLPLDVVGLDWRL----GIDEARSK-GI-TKTVQGNLDPSILL-APWEVIEQKTKEILDQGMESDGFIFNLGHGVFP---------DVSPEVLKKLTAFVHEYSQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2INF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80960 for 1532 contacts (-52.8/contact) +
2D Compatibility (PS) -22492 + (NN) -12683 + (LL) 10476
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -112209.0 ( -73.24 by residue)
QMean score : 0.451
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