Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------------------------------LDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKSVSSKAMPNMTLRLQ---
3CUO Chain:A ((1-98))
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC
General information:
TITO was launched using:
RESULT:
Template:
3CUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5011 for 229 contacts (21.9/contact) +
2D Compatibility (PS) -5407 + (NN) -3446 + (LL) 0
1D Compatibility (HY) 400 + (ID) 100
Total energy: -3542.0 ( -15.47 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3CUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CUO-query.scw
PDB file :
Tito_Scwrl_3CUO.pdb
: