Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
2HMW Chain:B ((9-144))
----FAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLNY-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HMW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109072 for 1037 contacts (-105.2/contact) +
2D Compatibility (PS) -14192 + (NN) -1509 + (LL) 5480
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -137893.0 ( -132.97 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_2HMW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HMW-query.scw
PDB file :
Tito_Scwrl_2HMW.pdb
: