Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDT--RNLDTDTSGQLIQSALETA---GHEVISRVVVPDDVTLIKQKINELAANGSFCLI-TNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
1JLJ Chain:C ((14-166))
-------QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSL-NVTPLGMLSRPVCGI-RGKTLIINLPGSKKGSQECFQ-FILPALPHAI-----
General information:
TITO was launched using:
RESULT:
Template:
1JLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112043 for 1208 contacts (-92.8/contact) +
2D Compatibility (PS) -15767 + (NN) -5474 + (LL) 1556
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -144428.0 ( -119.56 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_1JLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JLJ-query.scw
PDB file :
Tito_Scwrl_1JLJ.pdb
: