Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYRAFKQVVPAKGEEKRIG-IDFEK-ASGYSAYKVMQLVKNATTSKIKMQP--
1EF1 Chain:C ((1-89))
AEASADLRADAMAKD-----RSEEERTTEAEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRLGRDKYKTLRQIRQGNTKQRIDEFES
General information:
TITO was launched using:
RESULT:
Template:
1EF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14191 for 349 contacts (40.7/contact) +
2D Compatibility (PS) -8855 + (NN) -374 + (LL) 848
1D Compatibility (HY) 6000 + (ID) 650
Total energy: 11160.0 ( 31.98 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_1EF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EF1-query.scw
PDB file :
Tito_Scwrl_1EF1.pdb
: