Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEKNPAYGIYQFSNSGTATWFEFATEILKD-KD-VTVNPCTSDEFPQKAERPKTSIMSLEKVEKL-GFNI-PTWQDALVRFKK |
3SC6 Chain:A ((6-282)) | ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKE-RDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT-SLYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQ-HNMLRLNGFLQMPSWEEGLERFFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106081 for 2358 contacts (-45.0/contact) +
2D Compatibility (PS) -29297 + (NN) -13102 + (LL) 272
1D Compatibility (HY) -26000 + (ID) 5750
Total energy: -179958.0 ( -76.32 by residue)
QMean score : 0.496
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