Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVDASVAALAEA-GVELSDFAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
4Q16 Chain:B ((11-280)) | --LRSHIIRELHVQPDIDPGAEVERRVAFLCDYLQ-STPTKGFVLGISGGQDSTLAGRLCQLAVERRRSQ--GHGATFLAVRLPYGVQADEADAQQALDFIQADREVTVNIKEAADASVAAAQAALGSEVRDFVRGNVKARERMVAQYALAGQENLLVVGTDHAAEALTGFYTKYGDGGVDLTPLSGLTKRQGAQLLAHLGAPEGTWRK-------DDRPGLPDEVALGVTYAQIDAYLEGREVSDEAAARLERLFLNSRHKRALPVTPFDGWWQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43449 for 2075 contacts (-20.9/contact) +
2D Compatibility (PS) -28954 + (NN) -14653 + (LL) 580
1D Compatibility (HY) -21600 + (ID) 7150
Total energy: -115226.0 ( -55.53 by residue)
QMean score : 0.513
|
|
|