Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWLVFAQQLTHYLEGQNVDWLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNEGQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLICMPMIPIVIMAVMKIAKRILSGYWSDYTNLGTKFHENLSGLSILKAYDQDKYKQEEIVSDAERFRKATMSLLSMQLNSITIMDIISYSGAALGIGMSLIMFTNGTISMTGMLMFLLLSAEFFIPMRQLGSLFHVAMNGISACSKLFAYLELKEQVYGSVELAKPLEKIEVHHLTYTYEGGKAKALQDVSVHFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPLASLSGEAIRKQAVLVDNHGYLYANSIRENLLIGNPAANDSDLWNVLEQVSLADFVRKLPEQLNENLEEDGSNLSGGQRQRLLLARALLRQAEVYVFDEITSGVDLESEKIILLVLQELAKEKIVLFISHRLYNVLGADQVLVFDAGKLLEVASPERLQQESNYFKNYFLEEEALLKGGA |
4PL0 Chain:B ((344-557)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLSIRELSFSYSDDK-KILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLRLANYDASENEIFKVLKLANLS-VVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145625 for 1648 contacts (-88.4/contact) +
2D Compatibility (PS) -23467 + (NN) -8977 + (LL) 32764
1D Compatibility (HY) -21600 + (ID) 3400
Total energy: -170305.0 ( -103.34 by residue)
QMean score : 0.602
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