Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVT-YIKLIKELIK-DKEVV-KTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMH-----DFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDY---ELVDMTTVVIVGNKETYVK-NGKMITPRGYSL |
| 3NDC Chain:A ((5-236)) | TVHFIGAGPGAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTAPMSLD-AIIDTIAEAHAAGQDVARLHSGDLSIWSAMGEQLRRLRAL--NIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGRASAMP-AGETLENFARTGAVLAIHLSV-----HVLDEVVQKLVPHYGEDCPVAIVWRASWPDQRVVRATLATLQTSLGAELERTALILVGRSLATEDF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154389 for 1727 contacts (-89.4/contact) +
2D Compatibility (PS) -24385 + (NN) -8973 + (LL) 412
1D Compatibility (HY) -4400 + (ID) 2300
Total energy: -194035.0 ( -112.35 by residue)
QMean score : 0.480
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