Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFG-------ELATLACEKFYFRSSNRAALF-------VTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSV-----VADLKRVAIREVAIEKQEEI----------
2KI8 Chain:A ((1-146))
MGSSHH--HHHHSSGRENLYFQGHMLEVEVISGRTLNQGATVEEKLTEEYFNAVNYAEINEEDWNALGLQEGDRVKVKTEFGEVVVFAKKGDVPKGMIFIPMGPYANMVIDPSTDGTGMPQFKGVKGTVEKTDEKVLSVKELLEAIGS
General information:
TITO was launched using:
RESULT:
Template:
2KI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31064 for 763 contacts (-40.7/contact) +
2D Compatibility (PS) -12870 + (NN) -4281 + (LL) 396
1D Compatibility (HY) 2800 + (ID) 700
Total energy: -45719.0 ( -59.92 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_2KI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KI8-query.scw
PDB file :
Tito_Scwrl_2KI8.pdb
: