Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKN-INPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVVAD--PTWDA------PR-----TDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 1PFF Chain:A ((2-330)) | -------------------------------------------------------------ALEGKIAKLEHAEACAA---TASGMGAIAASVWTFLKAGDHLIS-DDCLYGCTHALF------EHQLRKFGVEVDFIDMA-----VPGNIEKHLKPNTRIVYFETP----ANPTLKVIDIEDAVKQARKQK--DILVIVDNTFASPIL-TNPLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITG--AIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCH------VVSL--AVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205795 for 2790 contacts (-73.8/contact) +
2D Compatibility (PS) -33811 + (NN) -15632 + (LL) 4776
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -257112.0 ( -92.15 by residue)
QMean score : 0.431
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