Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYK--SNKIVFKFRAPLER---ETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANF-----YTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLI-EKMAFSPRPERKGI--FYTKEAPKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFV------ALQLANGLLGGFANSKIFINVRE--KASLAYYASSRIDSFKGYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLET-----NDQAQGLIELVYNNVLRDA----NLDLENWIA-KIKQATKEEVVAAINKIKPD-TIYFLSKGGEELHGKNHI |
| 3GO9 Chain:A ((27-450)) | ----QQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALMSSASFTP-AQLQSLWQ-Q-GIDNERPLPPAITS----YDFTLYSLSLPNNR-----PDLLKDALAWLSDTAGNL-----AVSEQTVNAALNTATDPIATFPQNIQEPWWRY---RLKGSSLIGHD-P-GQPVTQPVDVEKLKQFYQQWYTPDAMTLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPV-SLMNEQAAQDTLSLMWDTPW-HPIQDSMALSRYWRSDLAREAL----FWHIKQVLEKNNQKNLKLGFDCRVQYQRAQCAIHLNTPVENLTANMTFVARELAALRANGLSQAEFDALMTQKNDQLSKLFATYARTDTDILMSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTTLVLMQPKGEP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118295 for 2955 contacts (-40.0/contact) +
2D Compatibility (PS) -43018 + (NN) -24335 + (LL) 1040
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -192158.0 ( -65.03 by residue)
QMean score : 0.457
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