Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNLQTKFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDL-LQTIERNNTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAEKNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSCGSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVKIIGEDK |
| 2GQT Chain:A ((2-267)) | ---------EFMRVERVLLKDYTTLGVGGPAELW-TVETREELKRA------TEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY---DLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPP-GGIVTRVRLKLKERPKEEILRRMAEVDRAR-KGQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEE----LPLELEWEVW------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120486 for 2203 contacts (-54.7/contact) +
2D Compatibility (PS) -27912 + (NN) -3969 + (LL) 2668
1D Compatibility (HY) -13600 + (ID) 4950
Total energy: -168249.0 ( -76.37 by residue)
QMean score : 0.471
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