Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDVVGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTDDDTTSSDTTGGQ
2J5U Chain:A ((74-283))-------------------------------------------------------------------------TENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGKVTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKFKKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTTD------------


General information:
TITO was launched using:
RESULT:

Template: 2J5U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41436 for 1527 contacts (-27.1/contact) +
2D Compatibility (PS) -23044 + (NN) -12241 + (LL) 5448
1D Compatibility (HY) -23600 + (ID) 10500
Total energy: -105373.0 ( -69.01 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_2J5U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J5U-query.scw
PDB file : Tito_Scwrl_2J5U.pdb: