Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKEELSSEKQLKLQESYESIELENFSN-EEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNISILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILRKADVNVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKSKQ |
2F8L Chain:A ((14-341)) | -ANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEVLQKE----EKQLKLQASYESIELENFSNEEIRKGLQLALLKGMKHG-IQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKS-QARKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215263 for 2678 contacts (-80.4/contact) +
2D Compatibility (PS) -34410 + (NN) -17810 + (LL) 488
1D Compatibility (HY) -44800 + (ID) 15150
Total energy: -326945.0 ( -122.09 by residue)
QMean score : 0.540
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