Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVSIIGATGYGGLELIRLLHQHSS-----VDIATLHSFSAQAETLATFYPHLKDLAVSPLEKINPTEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFRLKDRQLYEKWYGKSAAPTEYIGKAEYGLAEFR--E--KKETTFIANPGCYATATLLGLAPLATNKLIDPT-SIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMN-SHQHIPEIMQQLTKWDESIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHKLYESTYDNAPFVRIQPENVYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESDGLRFIPVYP |
| 2NQT Chain:A ((10-352)) | TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL-AHRVVEPTEAAVLGGHDAVFLALPHGHSAVLAQQLS-PETLIIDCGADFRLTDAAVWERFYGSSHA-----GSWPYGLPELPGARDQLRGTRRIAVPG-YPTAALLALFPALAADLI--EPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPEIAQGLRAVTDRDVSVSFTPVLIPASRGILATCTARTRSP--LSQLRAAYEKAYHAEPFIYLMPEGQLPRTGAVIGSNAAHIAVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPETDGLSVVGVAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165431 for 2963 contacts (-55.8/contact) +
2D Compatibility (PS) -36034 + (NN) -14217 + (LL) 476
1D Compatibility (HY) -16800 + (ID) 5850
Total energy: -237856.0 ( -80.28 by residue)
QMean score : 0.484
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