Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGM-STSLLVKKMTEAIEKQQVDATVIAVAEADFD--KYKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
3F6R Chain:A ((2-59))
-SKVLIVFGSSTGNTESIAQKLEELIAAGGHEV--TLLNAADASAENLADGYDAVLFGCSA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39170 for 344 contacts (-113.9/contact) +
2D Compatibility (PS) -6082 + (NN) -3710 + (LL) 3484
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -48378.0 ( -140.63 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3F6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6R-query.scw
PDB file :
Tito_Scwrl_3F6R.pdb
: