Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSHIKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRG-DFKSW----NEIKKTE-LKKPAMMLFSQG-----RLIIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTDDETIGMEIFVEKK
4Q7O Chain:A ((4-136))
MKNNIF----------LNLNKKSINNN-------HFVISIFFETIYQFET-KDTLLECFKN------------ITTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPINLAYH--YFNIAISDFLIAHPEYQKKCKEIQKTY---------------
General information:
TITO was launched using:
RESULT:
Template:
4Q7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99005 for 891 contacts (-111.1/contact) +
2D Compatibility (PS) -13102 + (NN) -5918 + (LL) 4984
1D Compatibility (HY) -8400 + (ID) 1400
Total energy: -122841.0 ( -137.87 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7O-query.scw
PDB file :
Tito_Scwrl_4Q7O.pdb
: