Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHLFKLDPAKNLPTNDVTKLIHSGTDGFIIGGTDNVQIEAVQNLYELLVETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHKELIKEMGE-------FIPWKRVTSEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGM-YGDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMAKYADTIIVGNIIYED-LEKALETATIFRKKTV
2F6U Chain:A ((9-233))
WRHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIEYS-GTYGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLRYADTIIVGNVIYEKGIDAFLETL--------
General information:
TITO was launched using:
RESULT:
Template:
2F6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128936 for 1755 contacts (-73.5/contact) +
2D Compatibility (PS) -23861 + (NN) -12876 + (LL) 688
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -189285.0 ( -107.85 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2F6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6U-query.scw
PDB file :
Tito_Scwrl_2F6U.pdb
: