Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGD-IPKEDVAKIRANAKF-DVDRIHEIELETRHDVVAFTRSVSESLGAERKWVHYGLTSTDVVDTANSYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEEMKRNLERFNFAADGVEFGKISGAVGTYANID----P------FVETYVCEKLGTTPA-PISTQTLQRDRHAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSENVTGLARVIRGHMVTAYENV-PLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNLTVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVP------FRELVEQDATITENLS--AEEIADCFDYNYHLKNVDLIFDRLGL |
| 2J91 Chain:A ((39-483)) | LASRYASPEMCFVFSDRYKFRTWRQLWLWLAEAEQTLGLPITDEQIREMKSNLENIDFKMAAEEEKRLRHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTDLIILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYTRKVDIEVLSVLASLGASVHKICTDIRLLAN--LKEMEEPF-----------YKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDSANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMV--GGSRQDCHEKIRVLSQQAASVVKQEGGDNDLIERIQVD----AYFSPIHSQLDHLLDPSSFTGRASQQVQRFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159735 for 3263 contacts (-49.0/contact) +
2D Compatibility (PS) -43876 + (NN) -15192 + (LL) 896
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -244957.0 ( -75.07 by residue)
QMean score : 0.487
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