Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIAFVFPGQGAQKVGMGQDVAAEYPEAKKIYDDADERLGFSITEIITEGPIELLTKSENAQPALVSTSVAILRAL--ETYGVKADYVAGHSLGEYSALVAGGFLEASDAIYLVRKRGELMEAAVP-NGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLANLNCPGQIVISGTTAGVEKAGEKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAEVKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIGSGKVLAGLIKKINRDVTVLSAGDAESVKSVAATLKGE
1NM2 Chain:A ((1-310))-HMLVLVAPGQGAQTPGFLTDWLAL-PGAADRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQPLLVAAGILSAAALGT---GFTPGAVAGHSVGEITAAVFAGVLDDTAALSLVRRRGLAMAEAAAVT-ETGMSALLGGDPEVSVAHLE-----RLGLTPANVNGAGQIVAAGTMEQLAALNEDKPEGVR-KVVPLKVAGAFHTRHMAPAVDKLAEAAKALTPADPKVTYVSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALPGVKTLALKTPDDLDAAREL----


General information:
TITO was launched using:
RESULT:

Template: 1NM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152924 for 2748 contacts (-55.6/contact) +
2D Compatibility (PS) -32347 + (NN) -13319 + (LL) 1128
1D Compatibility (HY) -12000 + (ID) 4550
Total energy: -214012.0 ( -77.88 by residue)
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_1NM2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NM2-query.scw
PDB file : Tito_Scwrl_1NM2.pdb: