Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA
3CJK Chain:B ((2-67))
-NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDA-
General information:
TITO was launched using:
RESULT:
Template:
3CJK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39491 for 464 contacts (-85.1/contact) +
2D Compatibility (PS) -7196 + (NN) -594 + (LL) 352
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -52779.0 ( -113.75 by residue)
QMean score : 0.772
(partial model without unconserved sides chains):
PDB file :
Tito_3CJK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJK-query.scw
PDB file :
Tito_Scwrl_3CJK.pdb
: