Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLCENENAYRR-RNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVY-YVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITE-QQARD-KVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL |
4EXR Chain:A ((22-173)) | --------NENLMEQDFKVPYTDAINIFKDKYKDADIVDLSLERDLNKFVYTVEGV------------------------------------DDNNEYKMKIDANTKDVLEDKTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNGIVKEWSLDKDLDVTFYKIRIDK-DKNEYDIKVDSKKGTVLKVEKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17339 for 1068 contacts (-16.2/contact) +
2D Compatibility (PS) -16415 + (NN) -5148 + (LL) 3616
1D Compatibility (HY) 800 + (ID) 450
Total energy: -34936.0 ( -32.71 by residue)
QMean score : 0.233
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