Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRTI---SDVDIATSAFPEEVKEIFQSTY----DTGIAHG--TVTVREN----NEFYEVTTFRTEGTYEDFRRPSEVKFIRSLEEDLQRRDFTMNAIAMDEH---------FALHDPFSGQEAIKNKAIKAVGKASERFHEDALRMMRGVRFLSQLDFQLDSETEKALESQIGLLQHTSVERITVEWLKMIKGPAIRRAMDLLLKVEMETYL-PGLKGEKK--------ALTEFGSW-DW-----------------------GKRTTDDAIWLGLVVTVQPNN---------------VNAFLKAWKLPNKTIQLVSKAYQYALKM--K------ETWLA----EELYHAGKAV---FSL-VNELNIIRGKENNQHKLSQAYEALP-------IHSKKDLAITGADLLKWSGESAGPWVKETLDKLECGVLCNEINNEKNQIKRWLGYHEE |
| 3WFO Chain:A ((24-448)) | -------FDDVAKVL-PREHYCFIVGGWVRDRILGEPVGYNIDVDFLTTADPVELAKNFAKRIGGHFFVFE---PTIASVVLHLPPYRYRFDFSPLKGK-------D-----LEKALIEDLKERDFTANAIAVNLDDVLSIGAKQTIVYDPTGGIKDLEQGLLRPV--SIENLKRDPVRVLRGFRIAIEKNLQLTEDFYEFVKEDPRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGEFTDVELLKWGALFHDIGKPQTFVTFYEHDKVGAQIVREIGERLRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140208 for 2395 contacts (-58.5/contact) +
2D Compatibility (PS) -32990 + (NN) -14054 + (LL) 4288
1D Compatibility (HY) -16800 + (ID) 3250
Total energy: -203014.0 ( -84.77 by residue)
QMean score : 0.497
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