Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEEVFAGLKKDPS-VHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
1IS8 Chain:J ((45-229))
--ELNLPNLAAAYSSILRSLGEDPQRQGLLKTPWRAATAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLP-NKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRG--KMNSKTVTSTMLGVFREDPKTREEFLTLIR--
General information:
TITO was launched using:
RESULT:
Template:
1IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97990 for 1344 contacts (-72.9/contact) +
2D Compatibility (PS) -20123 + (NN) -10096 + (LL) 508
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -150201.0 ( -111.76 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_1IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IS8-query.scw
PDB file :
Tito_Scwrl_1IS8.pdb
: