Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGS-DNVPVGTVLTIPQ |
2DJP Chain:A ((16-60)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEHQLEPGDTLAGLALKYG------VTMEQIKRANRLYTNDSIFLKKTLYI-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -15025 for 239 contacts (-62.9/contact) +
2D Compatibility (PS) -4844 + (NN) -2406 + (LL) 15256
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -10569.0 ( -44.22 by residue)
QMean score : 0.463
|
|
|