Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLS---------HHVCPECGQYDGKDVANS
1TWF Chain:I ((3-34))
-------------------------TFRFCRDCNNMLYPREDKENNRLLFECRTCSY---------
General information:
TITO was launched using:
RESULT:
Template:
1TWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3232 for 111 contacts (-29.1/contact) +
2D Compatibility (PS) -2642 + (NN) -1534 + (LL) 2204
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -7804.0 ( -70.31 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_1TWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TWF-query.scw
PDB file :
Tito_Scwrl_1TWF.pdb
: