Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTE-RAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKL-------IGTLE-KLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
2B78 Chain:A ((212-336))
----------------------------------------AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSF-----EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55946 for 821 contacts (-68.1/contact) +
2D Compatibility (PS) -11744 + (NN) -4976 + (LL) 5024
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -74942.0 ( -91.28 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2B78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B78-query.scw
PDB file :
Tito_Scwrl_2B78.pdb
: