Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE
3WG9 Chain:C ((4-206))
----KTIVSMAVIRRLPRYHRYLEELLKNDVKRISSRELSEKMGVTASQIRQDLNNFGG------GYNVEELYNNLTKILGLDKTYNTIIIGAGNLGQAIANYTSFEKSGFNLKGIFDINPRLFGLKIRDVEVMDVETVEDFIARNKIDIGILCIPKDNAQYTADRLVRAGIKAIWNFLPIDLKVPDDVILENVHLSDSLFTVSYRL--------
General information:
TITO was launched using:
RESULT:
Template:
3WG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135683 for 1392 contacts (-97.5/contact) +
2D Compatibility (PS) -21314 + (NN) -6196 + (LL) 1016
1D Compatibility (HY) -17600 + (ID) 3600
Total energy: -183377.0 ( -131.74 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_3WG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WG9-query.scw
PDB file :
Tito_Scwrl_3WG9.pdb
: