Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLKETLDQFASIDNILKLLKK--NPSFNKHC--IQERLPQKTIITS-NKQRKHIYIIEEGFMKLIFDDN-KPRDFSYILSKGAFPFLPVYIEDI-PEHTMMVALTDIVWWKIDIGFFKSMMEIEDPRNYLMLHQLAETRRRFYT-IAYQEKLTSRESIYYSLSTL-IEFGLRISEKVVELPEFLTYQILADHANTSKSYTSKVLGHLREDGILESQKKPWRINDVQKLQKLIEMNVPLVKIQKKLRADLHS |
1ZYB Chain:A ((20-232)) | ----------LLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQ-------GEKTFKVKMDDLARCLDDTRLNISKTLNELQDNGLIELHRKEILIPDAQKLL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116594 for 1382 contacts (-84.4/contact) +
2D Compatibility (PS) -20664 + (NN) 1525 + (LL) 4008
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -138775.0 ( -100.42 by residue)
QMean score : 0.329
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