Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMK-----DGSMFADLRKYLDKDFLVAHPTFSYESGLTNYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK |
3FN5 Chain:A ((27-163)) | --------------------------------------------------------------------AQQLPVIGGIAIPELGINLPIFKGLGN-TELIYG-------AGTMKEEQ---VMGGENNYSLASHHIFGITGSSQMLFSPLERAQNG------MSIYLTDKEKIYEYIIKDVFTVAPERVDV----------------------I----DDTAGLKEVTLVTCTDIE--ATERIIVKGELKT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58445 for 999 contacts (-58.5/contact) +
2D Compatibility (PS) -13800 + (NN) -555 + (LL) 7992
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -70858.0 ( -70.93 by residue)
QMean score : 0.412
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