Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGDSDSASMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVE-GNA----VSVTSKNASSDTRKVSFPVSTLSNPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK |
2O1A Chain:A ((17-138)) | -----------------------------QATSQPINFQVQKDGSSEKSHMDDYMQHPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNKKADTRTINVAVEPGYKSLTTKVHIVV--PQINYNHRYTTHLEFEKAIPTLA----------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2O1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -38632 for 800 contacts (-48.3/contact) +
2D Compatibility (PS) -13153 + (NN) -7417 + (LL) 6096
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -60256.0 ( -75.32 by residue)
QMean score : 0.439
|
|
|