Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPD---ETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
4EGU Chain:B ((5-106))
--DCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAK--EKGFDQTGFRVINNCGSDGGQEVKHLHYHIL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59846 for 678 contacts (-88.3/contact) +
2D Compatibility (PS) -10248 + (NN) -2652 + (LL) 2932
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -81264.0 ( -119.86 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_4EGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGU-query.scw
PDB file :
Tito_Scwrl_4EGU.pdb
: