Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKQFYTYDENGDYLETILVFEDE--KGLINQPKNSTNIEPSIIENGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFESNLG |
3M9Q Chain:A ((4-92)) | -LRDETPLFHKG----EIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQG--WRPSYDRAVR--------ATVLLKDTEENRQLQRELAEAAKL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17071 for 524 contacts (32.6/contact) +
2D Compatibility (PS) -9557 + (NN) -4111 + (LL) 728
1D Compatibility (HY) 800 + (ID) 900
Total energy: 4031.0 ( 7.69 by residue)
QMean score : 0.290
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