Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVLVCAAGM-STSLLVTKMRKAAEERGETCEIEAYSIAEV--SNLIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
3F6R Chain:A ((2-59))
-SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVT--LLNAADASAENLADGYDAVLFGCSA----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3F6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37562 for 342 contacts (-109.8/contact) +
2D Compatibility (PS) -6039 + (NN) -1967 + (LL) 3680
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -44488.0 ( -130.08 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3F6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6R-query.scw
PDB file :
Tito_Scwrl_3F6R.pdb
: