Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVLVIGANGKIGRLLVEKLAMEK-GFFVRAMVRKAEQVSELEKLGAKPIIADLKK--DFHYAYDEIEAVIFTAGSGGHTPASETVNIDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLAHYLKAKQAADEELKKSGLDYTIVRPVGLSDDPATG---------KIAEVS-GKPKTNIPRADVADFISEALSEKSSFYKTYTIESGD-TPIKQFFN
2JL1 Chain:A ((1-211))
FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD------NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE------SIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQ
General information:
TITO was launched using:
RESULT:
Template:
2JL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89556 for 1569 contacts (-57.1/contact) +
2D Compatibility (PS) -21756 + (NN) -12055 + (LL) -140
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -132157.0 ( -84.23 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_2JL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JL1-query.scw
PDB file :
Tito_Scwrl_2JL1.pdb
: