Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
1ZKO Chain:A ((14-134))
----KMKKYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCA
General information:
TITO was launched using:
RESULT:
Template:
1ZKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40853 for 938 contacts (-43.6/contact) +
2D Compatibility (PS) -12956 + (NN) -3674 + (LL) 216
1D Compatibility (HY) -10800 + (ID) 2950
Total energy: -71017.0 ( -75.71 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_1ZKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZKO-query.scw
PDB file :
Tito_Scwrl_1ZKO.pdb
: