Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKVVTD-LDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTIEYILEQNGKAI-LFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEKAIDELKDGEVLLFENTRF--------EDIDGKKESKNDPELGKYWASL---GDVFVNDAFGTAHRAHASNVGIASNL-ESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKADKVLVGGGMTFTFMAA-QGQEIGKSLLEADKVELAKGLLEKA---GDKLVLPVDAVVSKEFSNDAPF-HTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTIGVCEAIANLTD--ATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVASISDK
3C3A Chain:A ((6-419))LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGV--NLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGG---------WNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN-


General information:
TITO was launched using:
RESULT:

Template: 3C3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200753 for 3338 contacts (-60.1/contact) +
2D Compatibility (PS) -40934 + (NN) -8995 + (LL) 612
1D Compatibility (HY) -37600 + (ID) 9250
Total energy: -296920.0 ( -88.95 by residue)
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_3C3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C3A-query.scw
PDB file : Tito_Scwrl_3C3A.pdb: