Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIER----GVP-GGQMVNTAEVENYPGF-DSILGPDLSDKMLSGAKQFGAEYAYGDIKEV-VDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGA--FFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK |
4A5L Chain:B ((3-312)) | -----NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILT-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177685 for 2593 contacts (-68.5/contact) +
2D Compatibility (PS) -31400 + (NN) 741 + (LL) 1756
1D Compatibility (HY) -24000 + (ID) 6200
Total energy: -236788.0 ( -91.32 by residue)
QMean score : 0.545
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