Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGNGVQPLDPVAIQIGSISVKWYG-----VIIASAVVIALLLALSEANKR---KMDKEIIVDLLIWA------IPISIISARIYYVIFE--WDFYK-----NNLGEIVKIWHGGIAIYGALIGAVL-------TAIIFSRI-KKI--SFWQLADVVAPSLIIAQAIGRWGN-------------FMNQEAHGAETT---------RSFLESLHLPDFIINQMYIDGAYYQPTFLYESL-WNVLGFVILLIIRRTKIRRGELFLG-----YVIWYSFGRFFI-EGMRTDSLMW--------GDFRVSQALSLLLIVLSIGI--------IIYRRLKMNPPYYMEDKFGKVVKKK------------ |
| 4RDQ Chain:A ((1-366)) | TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFLIFISLYFAISLVYRLILSESQRLMFEKLALYCNSYAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNVDGEDEYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFPSMEHVVRAGLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPPYTAATAEYKRPSFLGSTFDIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140168 for 1545 contacts (-90.7/contact) +
2D Compatibility (PS) -28521 + (NN) -8472 + (LL) 0
1D Compatibility (HY) -20400 + (ID) 2450
Total energy: -200011.0 ( -129.46 by residue)
QMean score : 0.126
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