Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKIMIVDDHQLFREGIKRILELEDSFEVVAEAENGKNIVAKVREYKPDIVLMDINMPTVNGLDATEMLVRQFPSIKVIVLTIHDTDEYVTEALRAGAVGYLLKEMDAHELVEAVKIVDNGGAYIHPRVAIKLIREYRHLASTNTSQGVYGYQQPEVKMPLHILTHRECEVLQLLTDGKSNRGIGETLFISEKTVKNHVSSILQKMKVNDRTQAVVTAIKHGWVYIR
4LE0 Chain:B ((6-137))
--ISIFIAEDQQMLLGALGSLLNLEDDMEVVGKGTTGQDAVDFVKKRQPDVCIMDIEMPGKTGLEAAEEL--KDTGCKIIILTTFARPGYFQRAIKAGVKGYLLKDSPSEELANAIRSVMNGKRIYAPELMEDLYS--------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4LE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108668 for 1103 contacts (-98.5/contact) +
2D Compatibility (PS) -13932 + (NN) -3206 + (LL) 7540
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -132616.0 ( -120.23 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4LE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LE0-query.scw
PDB file :
Tito_Scwrl_4LE0.pdb
: