Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTIHWNINKQQSNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDQFV-ASYPAKAIQLMEKFWPGPLTVILPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLESTVIDCSLEIPIILRPGGVTKEQIEQIIGPVDISTNNTKETEKPKAPGMKYTHYAPKAPVYLIEGSTQFWQSEINKAEAANKKLGILATKELINQLNTSGTIETTGSIKALDEIATSLYKGLRAFDHADVDIIFAEVYPETELGAAIMNRLEKAAGNRRITE |
| 1JCU Chain:A ((1-208)) | -MLIRKITRKNPS-PDVLEEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPRFSRPS--GDAMELMERILPGPYTVVLERNE-LIPDVITGGSSRVGIRVPDDEICRRIAAR--FPVTATSANISGKPPSPRLEEIVRDLDAVDL-VLDAGDCLDMEPSTVIDLTVNPPRVLRRGKGPLDPV-LLRGAGDV--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87567 for 1432 contacts (-61.2/contact) +
2D Compatibility (PS) -23142 + (NN) -15495 + (LL) 8768
1D Compatibility (HY) -14000 + (ID) 3250
Total energy: -134686.0 ( -94.05 by residue)
QMean score : 0.405
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