Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVE---DLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYA---DPQECLRVVKEANIDALAAALGSVHG--PYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEH---------------------QIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKV-YDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA
3N9R Chain:U ((2-306))--LVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMG-----IDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI----------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVR-KVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANK-


General information:
TITO was launched using:
RESULT:

Template: 3N9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110373 for 2285 contacts (-48.3/contact) +
2D Compatibility (PS) -29714 + (NN) -14699 + (LL) 556
1D Compatibility (HY) -22800 + (ID) 5900
Total energy: -182930.0 ( -80.06 by residue)
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_3N9R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N9R-query.scw
PDB file : Tito_Scwrl_3N9R.pdb: