Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAPVILGVSEGAAKYMGGFKTVVKMTEGLVE---DLKITVPVAIHLDHGSSFDSCKAAIDAGFSSVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYA---DPQECLRVVKEANIDALAAALGSVHG--PYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEH---------------------QIKKAIELGHSKINVNTECQIVWTAAVREKLATDDKV-YDPRKVIGPGVDAIIKTVTEKIQEFGSNGKA |
3N9R Chain:U ((2-306)) | --LVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMG-----IDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI----------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVR-KVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3N9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110373 for 2285 contacts (-48.3/contact) +
2D Compatibility (PS) -29714 + (NN) -14699 + (LL) 556
1D Compatibility (HY) -22800 + (ID) 5900
Total energy: -182930.0 ( -80.06 by residue)
QMean score : 0.637
|
|
|