Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVKLNNGVEVPILGFGTYQITDAAEAEHAVKDAIKAGYRHIDTAQSYMNEEAVGRGIAASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYVDLLLIH--QPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEVNPFQQQTANLAILRKEGVAIEAWAPFAEGK-NDIFNNPVLTKIGAKYGKSAAQVILRWLVEQDIIVLAKSVKPERMAQNLAIFDFELTEADKEEIAGLDQGESQFFSHADPEMVKWMASRKLNV |
| 4Q3M Chain:E ((3-266)) | --SVKLNNNYEMPIIGLGTFR-SKKNDAYNAVKAALEGGYRHIDTAMIYGNEEEVGRAIKDSNIPREEIFVTTKLWNTDQGYEKTLEAFNTSLKNLGLDYIDLYLIHWFKGYDNALSTYRAFETLYEEGKVKAIGVSNFNVHHLMYLMENAKIPPMVNQVETHVTLQNHFLHDYCKKNNIQLEAYAPLMSHQIKDLLSNETMAKIAKKHDKTIPQIAIRWLIEREIVVIPKSITPERIVQNFDVFDFTLDEEDMKSIRSVNTGKKIF------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132312 for 2239 contacts (-59.1/contact) +
2D Compatibility (PS) -28003 + (NN) -9268 + (LL) 2052
1D Compatibility (HY) -25600 + (ID) 5400
Total energy: -198531.0 ( -88.67 by residue)
QMean score : 0.590
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